MLOC_74019 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.482913.093213.804515.218
LEAShoots from the seedlings (10 cm shoot stage)310.99235.067914.5682122.529
INF1Young developing inflorescences (5mm)1.790041.83681.032292.65339
INF2Developing inflorescences (1-1.5 cm)5.796585.727368.387569.06818
ROORoots from the seedlings (10 cm shoot stage)412.199110.194109.211201.052
NODDeveloping tillers at six leaf stage, 3rd internode7.129334.537383.4252734.061
CAR5Developing grain, bracts removed (5 DPA)59.606550.355937.352557.5792
CAR15Developing grain, bracts removed (15 DPA)97.6099113.5683.0084290.898



CDS Structure of MLOC_74019






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74019.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250749.1NoneNoneNoneNone
MLOC_74019.1CUST_6328_PI427708080AvailableAvailablecontig_64954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15960.1 +3 8e-53 176 110/117 (94%) 13103.m01885 protein hsp20/alpha crystallin family protein, putative, expressed
TAIR PP10 AT3G46230.1 +3 4e-46 157 95/117 (81%) | Symbols: ATHSP17.4, HSP17.4 | heat shock protein 17.4 | chr3:16984263-16984733 REVERSE LENGTH=156