MLOC_74010 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains702.175614.065573.589698.569
LEAShoots from the seedlings (10 cm shoot stage)254.796151.136178.162181.233
INF1Young developing inflorescences (5mm)785.431868.767792.659759.155
INF2Developing inflorescences (1-1.5 cm)478.828491.444539.406595.897
ROORoots from the seedlings (10 cm shoot stage)503.08539.093609.409725.173
NODDeveloping tillers at six leaf stage, 3rd internode80.358156.846598.3862242.071
CAR5Developing grain, bracts removed (5 DPA)287.942310.328290.946320.505
CAR15Developing grain, bracts removed (15 DPA)89.941391.559579.9082212.893



CDS Structure of MLOC_74010






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74010.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355287NoneNoneNoneNone
MLOC_74010.1CUST_6327_PI427708080AvailableAvailablecontig_64931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g59990.2 -2 1e-63 202 137/147 (93%) 13101.m14961 protein ribosomal protein L24, putative, expressed
TAIR PP10 AT2G36620.1 -2 4e-60 192 102/112 (91%) | Symbols: RPL24A | ribosomal protein L24 | chr2:15350548-15351819 REVERSE LENGTH=164