MLOC_74009 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5752950.9413511.029620.872161
LEAShoots from the seedlings (10 cm shoot stage)0.3600930.3685410.1103720.248135
INF1Young developing inflorescences (5mm)1.402431.522341.123521.1648
INF2Developing inflorescences (1-1.5 cm)1.143360.9435840.8390641.09088
ROORoots from the seedlings (10 cm shoot stage)0.3753180.6795690.7815020.815398
NODDeveloping tillers at six leaf stage, 3rd internode0.2445810.4208850.5805911.59442
CAR5Developing grain, bracts removed (5 DPA)1.199561.160331.362911.20404
CAR15Developing grain, bracts removed (15 DPA)0.2526640.1608240.2577630.500501



CDS Structure of MLOC_74009






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74009.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74009.4CUST_15997_PI427708080AvailableAvailablecontig_64931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g60000.1 +3 0.0 841 420/567 (74%) 13101.m06382 protein pentatricopeptide, putative, expressed
TAIR PP10 AT2G22410.1 +3 6e-124 393 211/583 (36%) | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080 FORWARD LENGTH=681