MLOC_73998 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.738331.648231.789982.02463
LEAShoots from the seedlings (10 cm shoot stage)3.6335913.732621.177310.7857
INF1Young developing inflorescences (5mm)0.12731800.05285830.0681068
INF2Developing inflorescences (1-1.5 cm)000.1025280.119186
ROORoots from the seedlings (10 cm shoot stage)13.58413.746888.154166.30253
NODDeveloping tillers at six leaf stage, 3rd internode2.853111.106230.3142344.63865
CAR5Developing grain, bracts removed (5 DPA)1.058950.6367710.2526190.756483
CAR15Developing grain, bracts removed (15 DPA)0.8314121.066820.5456832.46066



CDS Structure of MLOC_73998






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73998.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362046NoneNoneNoneNone
MLOC_73998.1CUST_6325_PI427708080AvailableAvailablecontig_64909 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g30320.1 +1 1e-30 114 81/120 (68%) 13102.m03311 protein drought-induced protein 1, putative, expressed
TAIR PP10 AT5G43260.1 +1 3e-12 63 53/100 (53%) chaperone protein dnaJ-related | chr5:17357693-17357986 REVERSE LENGTH=97