MLOC_73962 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06500610.21690.1825010.141525
LEAShoots from the seedlings (10 cm shoot stage)0.4365390.5194430.4820890.358389
INF1Young developing inflorescences (5mm)0.5783240.6427280.3622910.400325
INF2Developing inflorescences (1-1.5 cm)0.3588380.289010.5778740.359501
ROORoots from the seedlings (10 cm shoot stage)00.2335090.1969040.29423
NODDeveloping tillers at six leaf stage, 3rd internode0.232560.189820.1407830.513683
CAR5Developing grain, bracts removed (5 DPA)1.850081.447281.596931.35438
CAR15Developing grain, bracts removed (15 DPA)0.09257680.1321160.0902610.219865



CDS Structure of MLOC_73962






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73962.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73962.1CUST_13184_PI427708083AvailableAvailablecontig_64828 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g35600.1 +1 5e-34 133 71/121 (59%) 13102.m03870 protein PHD finger protein, putative, expressed
TAIR PP10 AT5G20510.1 +1 2e-31 124 65/112 (58%) | Symbols: AL5 | alfin-like 5 | chr5:6939991-6942846 REVERSE LENGTH=260