MLOC_73950 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.471812.856072.788852.32194
LEAShoots from the seedlings (10 cm shoot stage)5.654436.6141410.78865.48305
INF1Young developing inflorescences (5mm)0.5202240.6815960.7838480.490815
INF2Developing inflorescences (1-1.5 cm)0.38910.6385140.6671120.522721
ROORoots from the seedlings (10 cm shoot stage)13.35359.3937410.79099.60873
NODDeveloping tillers at six leaf stage, 3rd internode3.485142.85161.197046.46064
CAR5Developing grain, bracts removed (5 DPA)0.4615640.6041720.6017810.446388
CAR15Developing grain, bracts removed (15 DPA)2.563883.047462.450985.62684



CDS Structure of MLOC_73950






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73950.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361467NoneNoneNoneNone
MLOC_73950.1CUST_18439_PI427708080AvailableAvailablecontig_64796 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42234.2 -2 0.0 676 363/395 (92%) 13101.m04337 protein amino acid permease family protein, putative, expressed
TAIR PP10 AT2G01170.2 -2 0.0 549 298/393 (76%) | Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104157 REVERSE LENGTH=437