MLOC_73934 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.429561.515265.148745.153
LEAShoots from the seedlings (10 cm shoot stage)29.026155.5745101.26740.4613
INF1Young developing inflorescences (5mm)15.307116.850315.383110.2753
INF2Developing inflorescences (1-1.5 cm)12.020113.219412.818111.6741
ROORoots from the seedlings (10 cm shoot stage)32.667133.488861.825733.3489
NODDeveloping tillers at six leaf stage, 3rd internode20.290510.207216.457629.8361
CAR5Developing grain, bracts removed (5 DPA)15.596916.787218.139613.1028
CAR15Developing grain, bracts removed (15 DPA)24.924222.916315.926139.885



CDS Structure of MLOC_73934






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73934.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73934.1CUST_9910_PI427708083AvailableAvailablecontig_647600 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g44150.1 +1 1e-62 204 97/107 (91%) 13103.m04748 protein aminotransferase, putative, expressed
TAIR PP10 AT5G46180.1 +1 1e-54 182 84/108 (78%) | Symbols: DELTA-OAT | ornithine-delta-aminotransferase | chr5:18718766-18721271 REVERSE LENGTH=475