MLOC_73924 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.358734.592136.0830.6178
LEAShoots from the seedlings (10 cm shoot stage)30.484130.371830.777623.1863
INF1Young developing inflorescences (5mm)17.356720.778722.889813.656
INF2Developing inflorescences (1-1.5 cm)33.248724.55427.081726.2241
ROORoots from the seedlings (10 cm shoot stage)102.30578.329586.308888.2164
NODDeveloping tillers at six leaf stage, 3rd internode51.031576.808976.6022235.398
CAR5Developing grain, bracts removed (5 DPA)46.822944.218247.161237.0665
CAR15Developing grain, bracts removed (15 DPA)20.978923.999219.786839.0485



CDS Structure of MLOC_73924






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73924.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73924.1NoneAvailableAvailablecontig_64745 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15000.2 +3 2e-130 391 189/208 (91%) 13103.m12870 protein Zinc finger, C3HC4 type domain containing protein, expressed
TAIR PP10 AT3G09770.1 +3 3e-86 279 141/211 (67%) RING/U-box superfamily protein | chr3:2996402-2997835 REVERSE LENGTH=388