MLOC_73877 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.051540.529446.201439.6342
LEAShoots from the seedlings (10 cm shoot stage)42.287229.458622.192426.0226
INF1Young developing inflorescences (5mm)35.654133.185435.863128.0439
INF2Developing inflorescences (1-1.5 cm)23.238625.290531.241426.5187
ROORoots from the seedlings (10 cm shoot stage)36.131545.351173.019653.0416
NODDeveloping tillers at six leaf stage, 3rd internode47.929711.884316.298639.7883
CAR5Developing grain, bracts removed (5 DPA)29.881531.680734.418528.5477
CAR15Developing grain, bracts removed (15 DPA)7.759598.748778.4194218.3701



CDS Structure of MLOC_73877






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73877.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73877.1CUST_13181_PI427708083AvailableAvailablecontig_64626 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54590.1 -3 1e-37 141 68/71 (96%) 13101.m05740 protein ras-related protein, putative, expressed
TAIR PP10 AT1G16920.1 -3 4e-35 133 65/71 (92%) | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog A1B | chr1:5787489-5789147 REVERSE LENGTH=216