- Predicted Gene MLOC_73877
MLOC_73877 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_73877_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_73877_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 36.0515 | 40.5294 | 46.2014 | 39.6342 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 42.2872 | 29.4586 | 22.1924 | 26.0226 |
INF1 | Young developing inflorescences (5mm) | 35.6541 | 33.1854 | 35.8631 | 28.0439 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.2386 | 25.2905 | 31.2414 | 26.5187 |
ROO | Roots from the seedlings (10 cm shoot stage) | 36.1315 | 45.3511 | 73.0196 | 53.0416 |
NOD | Developing tillers at six leaf stage, 3rd internode | 47.9297 | 11.8843 | 16.2986 | 39.7883 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.8815 | 31.6807 | 34.4185 | 28.5477 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.75959 | 8.74877 | 8.41942 | 18.3701 |
CDS Structure of MLOC_73877
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73877.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g54590.1 |
-3 |
1e-37 |
141 |
68/71 (96%) |
13101.m05740 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT1G16920.1 |
-3 |
4e-35 |
133 |
65/71 (92%) |
| Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog A1B | chr1:5787489-5789147 REVERSE LENGTH=216 |