MLOC_73858 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.8428316.107712.724512.474
LEAShoots from the seedlings (10 cm shoot stage)6.813494.9214.15844.62234
INF1Young developing inflorescences (5mm)40.79133.949130.857628.53
INF2Developing inflorescences (1-1.5 cm)29.145124.332523.451826.9667
ROORoots from the seedlings (10 cm shoot stage)3.4809711.19898.2425811.5804
NODDeveloping tillers at six leaf stage, 3rd internode0.645360.5750691.215262.32445
CAR5Developing grain, bracts removed (5 DPA)18.702316.981518.032816.3732
CAR15Developing grain, bracts removed (15 DPA)4.513823.673363.167918.41307



CDS Structure of MLOC_73858






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73858.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73858.1CUST_15979_PI427708080AvailableAvailablecontig_64584 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66500.1 +2 0.0 2344 1203/1421 (85%) 13101.m07198 protein phosphoribosylformylglycinamidine synthase, putative, expressed
TAIR PP10 AT1G74260.1 +2 0.0 1969 998/1349 (74%) | Symbols: PUR4 | purine biosynthesis 4 | chr1:27923005-27927764 REVERSE LENGTH=1407