MLOC_73852 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4774371.941521.842611.32526
LEAShoots from the seedlings (10 cm shoot stage)2.198980.563560.8830531.00969
INF1Young developing inflorescences (5mm)4.710684.999385.756533.96762
INF2Developing inflorescences (1-1.5 cm)7.441829.004557.118287.90487
ROORoots from the seedlings (10 cm shoot stage)0.3093521.155020.8086461.06974
NODDeveloping tillers at six leaf stage, 3rd internode1.40211.916250.8684765.13163
CAR5Developing grain, bracts removed (5 DPA)7.583148.747887.247826.88881
CAR15Developing grain, bracts removed (15 DPA)1.018490.7232821.393592.09996



CDS Structure of MLOC_73852






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73852.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73852.3CUST_13179_PI427708083AvailableAvailablecontig_64569 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50622.4 +1 5e-29 91 45/50 (90%) 13101.m05270 protein DNA-binding protein DSP1, putative, expressed
TAIR PP10 AT1G75380.3 +1 2e-19 73 32/50 (64%) | Symbols: ATBBD1, BBD1 | bifunctional nuclease in basal defense response 1 | chr1:28281789-28283631 REVERSE LENGTH=325