- Predicted Gene MLOC_73852
MLOC_73852 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_73852_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_73852_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.477437 | 1.94152 | 1.84261 | 1.32526 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.19898 | 0.56356 | 0.883053 | 1.00969 |
INF1 | Young developing inflorescences (5mm) | 4.71068 | 4.99938 | 5.75653 | 3.96762 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.44182 | 9.00455 | 7.11828 | 7.90487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.309352 | 1.15502 | 0.808646 | 1.06974 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.4021 | 1.91625 | 0.868476 | 5.13163 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.58314 | 8.74788 | 7.24782 | 6.88881 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.01849 | 0.723282 | 1.39359 | 2.09996 |
CDS Structure of MLOC_73852
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73852.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g50622.4 |
+1 |
5e-29 |
91 |
45/50 (90%) |
13101.m05270 protein DNA-binding protein DSP1, putative, expressed |
TAIR PP10 |
AT1G75380.3 |
+1 |
2e-19 |
73 |
32/50 (64%) |
| Symbols: ATBBD1, BBD1 | bifunctional nuclease in basal defense response 1 | chr1:28281789-28283631 REVERSE LENGTH=325 |