MLOC_73838 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains50.050535.370140.910928.7086
LEAShoots from the seedlings (10 cm shoot stage)21.064115.109326.368512.8028
INF1Young developing inflorescences (5mm)15.901414.883819.81789.43274
INF2Developing inflorescences (1-1.5 cm)13.90812.206811.39710.071
ROORoots from the seedlings (10 cm shoot stage)42.514927.750425.169225.18
NODDeveloping tillers at six leaf stage, 3rd internode24.333219.020824.02947.549
CAR5Developing grain, bracts removed (5 DPA)18.620122.883224.53914.2503
CAR15Developing grain, bracts removed (15 DPA)7.442574.933446.2077810.1364



CDS Structure of MLOC_73838






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73838.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73838.1NoneAvailableAvailablecontig_64537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42000.1 +3 5e-27 108 68/74 (92%) 13104.m04132 protein 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed
TAIR PP10 AT2G44050.1 +3 2e-25 103 61/73 (84%) | Symbols: COS1 | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase | chr2:18224304-18225917 FORWARD LENGTH=227