- Predicted Gene MLOC_73838
MLOC_73838 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_73838_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 50.0505 | 35.3701 | 40.9109 | 28.7086 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 21.0641 | 15.1093 | 26.3685 | 12.8028 |
INF1 | Young developing inflorescences (5mm) | 15.9014 | 14.8838 | 19.8178 | 9.43274 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.908 | 12.2068 | 11.397 | 10.071 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.5149 | 27.7504 | 25.1692 | 25.18 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.3332 | 19.0208 | 24.029 | 47.549 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.6201 | 22.8832 | 24.539 | 14.2503 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.44257 | 4.93344 | 6.20778 | 10.1364 |
CDS Structure of MLOC_73838
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73838.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g42000.1 |
+3 |
5e-27 |
108 |
68/74 (92%) |
13104.m04132 protein 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT2G44050.1 |
+3 |
2e-25 |
103 |
61/73 (84%) |
| Symbols: COS1 | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase | chr2:18224304-18225917 FORWARD LENGTH=227 |