MLOC_73817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains103.985103.22393.3251113.314
LEAShoots from the seedlings (10 cm shoot stage)300.565256.467211.812235.078
INF1Young developing inflorescences (5mm)51.220134.951136.473337.6301
INF2Developing inflorescences (1-1.5 cm)23.511322.922422.554427.9462
ROORoots from the seedlings (10 cm shoot stage)12.35923.576120.180229.8806
NODDeveloping tillers at six leaf stage, 3rd internode70.786451.025648.1465182.787
CAR5Developing grain, bracts removed (5 DPA)67.19769.106363.853773.2159
CAR15Developing grain, bracts removed (15 DPA)6.620756.000456.7581116.1559



CDS Structure of MLOC_73817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73817.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361306NoneNoneNoneNone
MLOC_73817.1CUST_6308_PI427708080AvailableAvailablecontig_6449 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g24020.1 +1 2e-137 395 197/211 (93%) 13103.m02840 protein ribosomal protein L6, putative, expressed
TAIR PP10 AT1G05190.1 +1 5e-106 314 151/208 (73%) | Symbols: emb2394 | Ribosomal protein L6 family | chr1:1502515-1503738 REVERSE LENGTH=223