MLOC_73746 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.819061.78042.303742.02679
LEAShoots from the seedlings (10 cm shoot stage)1.065892.04562.229511.4536
INF1Young developing inflorescences (5mm)1.934560.743880.4814740.938583
INF2Developing inflorescences (1-1.5 cm)0.03500410.05729930.2621080.127058
ROORoots from the seedlings (10 cm shoot stage)12.63917.876787.112429.26763
NODDeveloping tillers at six leaf stage, 3rd internode7.03342.182713.011365.29131
CAR5Developing grain, bracts removed (5 DPA)1.234760.9504370.7101511.03193
CAR15Developing grain, bracts removed (15 DPA)0.7388270.8330550.3806921.8484



CDS Structure of MLOC_73746






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73746.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355141NoneNoneNoneNone
MLOC_73746.1CUST_6301_PI427708080AvailableAvailablecontig_64332 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g33120.1 +3 0.0 1454 736/905 (81%) 13111.m03237 protein respiratory burst oxidase, putative, expressed
TAIR PP10 AT5G47910.1 +3 0.0 1156 586/901 (65%) | Symbols: RBOHD, ATRBOHD | respiratory burst oxidase homologue D | chr5:19397585-19401768 FORWARD LENGTH=921