MLOC_73713 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains113.42213.759184.381197.663
LEAShoots from the seedlings (10 cm shoot stage)337.849320.456251.415286.236
INF1Young developing inflorescences (5mm)178.355146.325140.796136.916
INF2Developing inflorescences (1-1.5 cm)118.958120.515109.19134.915
ROORoots from the seedlings (10 cm shoot stage)62.3794122.36691.8556154.27
NODDeveloping tillers at six leaf stage, 3rd internode136.09119.459123.836457.662
CAR5Developing grain, bracts removed (5 DPA)227.196201.131226.011222.869
CAR15Developing grain, bracts removed (15 DPA)126.714129.502115.757292.003



CDS Structure of MLOC_73713






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73713.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358201NoneNoneNoneNone
MLOC_73713.1CUST_6298_PI427708080AvailableAvailablecontig_64214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32560.2 -3 0.0 1558 879/908 (97%) 13104.m03121 protein ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed
TAIR PP10 AT5G50920.1 -3 0.0 1379 770/868 (89%) | Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 | CLPC homologue 1 | chr5:20715710-20719800 REVERSE LENGTH=929