MLOC_737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4101030.2948140.06841280.0940269
LEAShoots from the seedlings (10 cm shoot stage)0.6924071.027340.5399820.194404
INF1Young developing inflorescences (5mm)01.056480.3842020.161342
INF2Developing inflorescences (1-1.5 cm)1.542861.358550.6375920.962898
ROORoots from the seedlings (10 cm shoot stage)00.34404500.406063
NODDeveloping tillers at six leaf stage, 3rd internode00.3418820.7081240.330869
CAR5Developing grain, bracts removed (5 DPA)00.3106981.354120.311918
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_737






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_737.1CUST_13176_PI427708083AvailableAvailablecontig_105462 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38430.1 -1 2e-23 96 48/65 (74%) 13112.m03958 protein SR repressor protein, putative, expressed
TAIR PP10 AT3G55460.1 -1 2e-13 67 38/61 (62%) | Symbols: SCL30, At-SCL30 | SC35-like splicing factor 30 | chr3:20561024-20563502 FORWARD LENGTH=262