MLOC_73663 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.832210.896511.103913.0566
LEAShoots from the seedlings (10 cm shoot stage)10.503725.350316.853717.6048
INF1Young developing inflorescences (5mm)0.02754940.060988900.0506051
INF2Developing inflorescences (1-1.5 cm)0.0568458000.0705974
ROORoots from the seedlings (10 cm shoot stage)21.966916.23118.874524.9426
NODDeveloping tillers at six leaf stage, 3rd internode4.708982.951927.9155514.2718
CAR5Developing grain, bracts removed (5 DPA)1.549351.295351.23731.58946
CAR15Developing grain, bracts removed (15 DPA)2.85542.472323.752948.02288



CDS Structure of MLOC_73663






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73663.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376705NoneNoneNoneNone
MLOC_73663.1CUST_6291_PI427708080AvailableAvailablecontig_64108 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g30610.2 +1 6e-51 174 103/184 (56%) 13102.m12324 protein expressed protein
TAIR PP10 AT1G27300.1 +1 4e-13 68 44/154 (29%) unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr1:9483324-9484194 FORWARD LENGTH=200