MLOC_73659 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08270880.0560910.119660.0817205
LEAShoots from the seedlings (10 cm shoot stage)0.14093100.1404820.119648
INF1Young developing inflorescences (5mm)0.1387620.0829060.120550.106696
INF2Developing inflorescences (1-1.5 cm)00.07461220.03625190.0796576
ROORoots from the seedlings (10 cm shoot stage)00.1177040.04755090.17628
NODDeveloping tillers at six leaf stage, 3rd internode00.01083380.01906480.0598481
CAR5Developing grain, bracts removed (5 DPA)0.1165390.09264340.07156590.101017
CAR15Developing grain, bracts removed (15 DPA)0.01265610.015090700.0471505



CDS Structure of MLOC_73659






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73659.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374972NoneNoneNoneNone
MLOC_73659.1CUST_7031_PI427708080AvailableAvailablecontig_64092 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57230.1 +2 0.0 937 533/670 (80%) 13101.m06070 protein BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
TAIR PP10 AT5G03250.1 +2 0.0 581 327/643 (51%) Phototropic-responsive NPH3 family protein | chr5:774591-776855 FORWARD LENGTH=592