MLOC_73614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.095321.340531.420691.6213
LEAShoots from the seedlings (10 cm shoot stage)0.8131140.2035390.2967610.368683
INF1Young developing inflorescences (5mm)0.0647460.05005010.05400330.052651
INF2Developing inflorescences (1-1.5 cm)0.02232490.0213450.02692130.0282401
ROORoots from the seedlings (10 cm shoot stage)2.97982.683631.861353.08115
NODDeveloping tillers at six leaf stage, 3rd internode1.178450.9374890.7678422.59257
CAR5Developing grain, bracts removed (5 DPA)0.6572850.9366790.7378120.861613
CAR15Developing grain, bracts removed (15 DPA)3.519182.845613.275268.44229



CDS Structure of MLOC_73614






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73614.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370513NoneNoneNoneNone
MLOC_73614.1CUST_6285_PI427708080AvailableAvailablecontig_64040 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45020.1 +1 2e-117 352 189/284 (67%) 13104.m04507 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G52260.1 +1 1e-59 201 93/141 (66%) | Symbols: AtMYB19, MYB19 | myb domain protein 19 | chr5:21220165-21221223 FORWARD LENGTH=268