MLOC_73611 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2043021.667921.389781.41214
LEAShoots from the seedlings (10 cm shoot stage)0.4013440.6433250.9637960.573527
INF1Young developing inflorescences (5mm)3.052963.251183.504293.1496
INF2Developing inflorescences (1-1.5 cm)3.125533.165843.251333.98987
ROORoots from the seedlings (10 cm shoot stage)00.7185340.4637041.18729
NODDeveloping tillers at six leaf stage, 3rd internode0.2324010.3846371.136741.60156
CAR5Developing grain, bracts removed (5 DPA)0.7249161.213691.202721.24965
CAR15Developing grain, bracts removed (15 DPA)0.3887490.2970140.5632651.0621



CDS Structure of MLOC_73611






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73611.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73611.3CUST_9875_PI427708083AvailableAvailablecontig_64033 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62040.3 -3 1e-36 129 80/90 (89%) 13101.m06632 protein ruvB-like, putative, expressed
TAIR PP10 AT5G22330.1 -3 6e-31 117 71/90 (79%) | Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458