MLOC_73576 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains810.107536.206490.328626.886
LEAShoots from the seedlings (10 cm shoot stage)376.482169.069216.876223.648
INF1Young developing inflorescences (5mm)1007.571048.971087.74933.388
INF2Developing inflorescences (1-1.5 cm)903.398762.583826.272956.742
ROORoots from the seedlings (10 cm shoot stage)548.092530.261562.149693.992
NODDeveloping tillers at six leaf stage, 3rd internode106.826106.126199.718419.739
CAR5Developing grain, bracts removed (5 DPA)363.825385.774363.436393.578
CAR15Developing grain, bracts removed (15 DPA)220.307193.642219.098526.185



CDS Structure of MLOC_73576






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73576.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252606.1NoneNoneNoneNone
MLOC_73576.1CUST_6280_PI427708080AvailableAvailablecontig_6396 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08430.1 +1 4e-103 303 149/171 (87%) 13109.m00705 protein ribosomal protein L22, putative, expressed
TAIR PP10 AT1G27400.1 +1 6e-101 297 145/170 (85%) Ribosomal protein L22p/L17e family protein | chr1:9515230-9516725 FORWARD LENGTH=176