MLOC_73554 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains79.676268.455681.939571.2026
LEAShoots from the seedlings (10 cm shoot stage)80.060234.190731.503738.6169
INF1Young developing inflorescences (5mm)0.4281870.189950.1564690.228061
INF2Developing inflorescences (1-1.5 cm)0.4849830.2367550.6049390.450238
ROORoots from the seedlings (10 cm shoot stage)135.23374.2792100.32288.4244
NODDeveloping tillers at six leaf stage, 3rd internode658.185293.799135.634647.351
CAR5Developing grain, bracts removed (5 DPA)49.039853.308659.531350.9375
CAR15Developing grain, bracts removed (15 DPA)13.430715.416316.474234.994



CDS Structure of MLOC_73554






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73554.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73554.1CUST_13167_PI427708083AvailableAvailablecontig_63910 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06250.2 -3 1e-34 133 62/85 (73%) 13106.m10511 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 -2 2e-11 65 32/72 (44%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372