MLOC_73536 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4041050.2997760.6116270.429262
LEAShoots from the seedlings (10 cm shoot stage)0.6255940.9502390.6635460.644433
INF1Young developing inflorescences (5mm)0.9490490.8150651.003140.844664
INF2Developing inflorescences (1-1.5 cm)1.861941.6661.842362.10672
ROORoots from the seedlings (10 cm shoot stage)1.224681.071590.8411941.31526
NODDeveloping tillers at six leaf stage, 3rd internode1.033411.215331.771054.19856
CAR5Developing grain, bracts removed (5 DPA)2.285052.009882.348012.36536
CAR15Developing grain, bracts removed (15 DPA)2.092932.133571.570875.06317



CDS Structure of MLOC_73536






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73536.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354106NoneNoneNoneNone
MLOC_73536.2CUST_18436_PI427708080AvailableAvailablecontig_63412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g52970.1 -2 6e-162 471 262/443 (59%) 13101.m05549 protein OsFBX22 - F-box domain containing protein, expressed
TAIR PP10 AT1G13570.1 -2 6e-14 74 69/226 (31%) F-box/RNI-like superfamily protein | chr1:4642528-4643930 REVERSE LENGTH=416