MLOC_73532 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.2126217.492916.728414.2774
LEAShoots from the seedlings (10 cm shoot stage)22.978929.897422.706820.1552
INF1Young developing inflorescences (5mm)16.364316.839719.202713.3003
INF2Developing inflorescences (1-1.5 cm)25.555921.282925.998524.649
ROORoots from the seedlings (10 cm shoot stage)11.699521.96719.622722.4128
NODDeveloping tillers at six leaf stage, 3rd internode27.728426.719525.39879.2672
CAR5Developing grain, bracts removed (5 DPA)21.961320.305921.054819.1461
CAR15Developing grain, bracts removed (15 DPA)15.663314.845616.076932.3842



CDS Structure of MLOC_73532






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73532.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73532.1CUST_15938_PI427708080AvailableAvailablecontig_63856 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g35530.1 -3 0.0 933 514/646 (80%) 13105.m03723 protein expressed protein
TAIR PP10 AT1G34320.1 -3 0.0 669 386/656 (59%) Protein of unknown function (DUF668) | chr1:12520713-12524046 FORWARD LENGTH=657