MLOC_73531 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9459510.27438.375728.645
LEAShoots from the seedlings (10 cm shoot stage)24.352323.069819.917616.9629
INF1Young developing inflorescences (5mm)13.795213.634316.365510.5265
INF2Developing inflorescences (1-1.5 cm)14.736312.979315.931513.7615
ROORoots from the seedlings (10 cm shoot stage)2.237774.718564.1244.34434
NODDeveloping tillers at six leaf stage, 3rd internode7.198899.3381717.689530.9357
CAR5Developing grain, bracts removed (5 DPA)9.094758.873719.053057.5624
CAR15Developing grain, bracts removed (15 DPA)2.246922.526162.294424.82691



CDS Structure of MLOC_73531






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73531.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362475NoneNoneNoneNone
MLOC_73531.2CUST_18435_PI427708080AvailableAvailablecontig_63412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g35540.1 +3 0.0 580 282/324 (87%) 13105.m03724 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10 AT4G02790.1 +3 1e-152 465 218/301 (72%) GTP-binding family protein | chr4:1247416-1249351 FORWARD LENGTH=372