MLOC_73512 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.978354.856464.87616.00911
LEAShoots from the seedlings (10 cm shoot stage)3.684915.430097.716545.6798
INF1Young developing inflorescences (5mm)8.2553710.03228.777128.73653
INF2Developing inflorescences (1-1.5 cm)9.518888.516429.3839811.4995
ROORoots from the seedlings (10 cm shoot stage)5.80648.211436.8122211.4255
NODDeveloping tillers at six leaf stage, 3rd internode4.248313.812697.2734117.6064
CAR5Developing grain, bracts removed (5 DPA)4.265073.886783.908414.61761
CAR15Developing grain, bracts removed (15 DPA)2.170731.815211.632765.03169



CDS Structure of MLOC_73512






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73512.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73512.7CUST_15932_PI427708080AvailableAvailablecontig_63832 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42540.1 -1 3e-92 278 171/216 (79%) 13102.m04719 protein expressed protein
TAIR PP10 AT1G73350.2 -1 3e-61 198 143/232 (62%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr1:27575683-27577126 REVERSE LENGTH=210