MLOC_73506 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.439876.112084.771565.52564
LEAShoots from the seedlings (10 cm shoot stage)4.927424.067094.664464.23687
INF1Young developing inflorescences (5mm)7.54467.756057.954856.78691
INF2Developing inflorescences (1-1.5 cm)8.813019.666959.3973510.7687
ROORoots from the seedlings (10 cm shoot stage)3.990035.311684.184566.94359
NODDeveloping tillers at six leaf stage, 3rd internode2.14312.014283.674458.5382
CAR5Developing grain, bracts removed (5 DPA)7.274577.440797.489977.69514
CAR15Developing grain, bracts removed (15 DPA)1.908411.587651.802544.26198



CDS Structure of MLOC_73506






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73506.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251754.1NoneNoneNoneNone
MLOC_73506.2CUST_6277_PI427708080AvailableAvailablecontig_63806 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g19630.2 +2 4e-119 357 199/250 (80%) 13105.m02077 protein peptide chain release factor protein, putative, expressed
TAIR PP10 AT2G47020.1 +2 3e-121 365 203/310 (65%) Peptide chain release factor 1 | chr2:19320090-19322279 REVERSE LENGTH=413