MLOC_7348 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9339250.8579320.7076870.977323
LEAShoots from the seedlings (10 cm shoot stage)0.5729160.8690690.3806410.590914
INF1Young developing inflorescences (5mm)1.923092.130262.177331.92032
INF2Developing inflorescences (1-1.5 cm)1.414722.36292.241592.44278
ROORoots from the seedlings (10 cm shoot stage)0.4814510.9432360.9513541.29985
NODDeveloping tillers at six leaf stage, 3rd internode0.4379360.6073150.669852.45499
CAR5Developing grain, bracts removed (5 DPA)1.39151.279281.526551.49419
CAR15Developing grain, bracts removed (15 DPA)0.6675950.3786540.5648931.34737



CDS Structure of MLOC_7348






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7348.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7348.1CUST_15927_PI427708080AvailableAvailablecontig_139058 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g30930.1 -2 0.0 844 412/460 (90%) 13107.m03122 protein pentatricopeptide repeat domain containing protein, putative, expressed
TAIR PP10 AT1G03560.1 -2 0.0 553 270/458 (59%) Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:890428-892410 REVERSE LENGTH=660