MLOC_73455 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.985511.68211.17197.6217
LEAShoots from the seedlings (10 cm shoot stage)11.03547.2316.873176.47893
INF1Young developing inflorescences (5mm)26.745426.855225.127817.565
INF2Developing inflorescences (1-1.5 cm)30.139228.58926.091925.7692
ROORoots from the seedlings (10 cm shoot stage)4.138659.128995.865167.982
NODDeveloping tillers at six leaf stage, 3rd internode2.722332.987645.2162910.3383
CAR5Developing grain, bracts removed (5 DPA)10.683511.255211.57518.55451
CAR15Developing grain, bracts removed (15 DPA)4.57264.763933.971327.96708



CDS Structure of MLOC_73455






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73455.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73455.1CUST_13163_PI427708083AvailableAvailablecontig_6369 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g29360.1 -1 9e-171 523 256/297 (86%) 13107.m02945 protein tetratricopeptide repeat domain containing protein, expressed
TAIR PP10 AT2G06210.1 -1 1e-109 361 180/307 (59%) | Symbols: ELF8, VIP6 | binding | chr2:2429108-2436588 REVERSE LENGTH=1091