MLOC_73440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.851342.032847.838245.2704
LEAShoots from the seedlings (10 cm shoot stage)22.502513.340314.618514.0321
INF1Young developing inflorescences (5mm)20.780520.562725.925518.4926
INF2Developing inflorescences (1-1.5 cm)19.896218.645419.469721.1157
ROORoots from the seedlings (10 cm shoot stage)23.474318.885222.947623.34
NODDeveloping tillers at six leaf stage, 3rd internode24.386715.720920.693748.79
CAR5Developing grain, bracts removed (5 DPA)16.942417.025620.128517.6601
CAR15Developing grain, bracts removed (15 DPA)12.740511.221613.102328.4022



CDS Structure of MLOC_73440






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73440.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250372.1NoneNoneNoneNone
MLOC_73440.3CUST_18434_PI427708080AvailableAvailablecontig_63412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g51710.1 +1 4e-131 394 203/251 (81%) 13105.m05590 protein pleckstrin homology domain-containing protein-related taxo, putative, expressed
TAIR PP10 AT4G23895.2 +1 6e-74 243 125/227 (55%) Pleckstrin homology (PH) domain-containing protein | chr4:12422883-12424146 FORWARD LENGTH=247