- Predicted Gene MLOC_73427
MLOC_73427 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.6697 | 12.5579 | 11.2608 | 12.4734 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2429 | 2.16485 | 4.56297 | 5.58392 |
| INF1 | Young developing inflorescences (5mm) | 9.07318 | 5.21452 | 5.08628 | 5.94612 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.6005 | 17.5263 | 19.7087 | 20.3073 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.810671 | 2.52784 | 4.65627 | 3.10447 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.999325 | 2.28553 | 0.533169 | 5.30279 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.73601 | 9.20855 | 6.81957 | 9.105 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.220627 | 0.0769239 | 0.539448 | 0.649998 |
CDS Structure of MLOC_73427
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73427.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g02060.1 |
+3 |
0.0 |
530 |
315/445 (71%) |
13101.m00140 protein TOO MANY MOUTHS precursor, putative, expressed |
| TAIR PP10 |
AT3G25670.1 |
+3 |
1e-103 |
330 |
206/448 (46%) |
Leucine-rich repeat (LRR) family protein | chr3:9344532-9346301 REVERSE LENGTH=475 |
