- Predicted Gene MLOC_73329
MLOC_73329 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.6456 | 40.5176 | 45.4386 | 52.0976 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 45.1361 | 52.1226 | 50.4574 | 50.3004 |
| INF1 | Young developing inflorescences (5mm) | 27.4338 | 32.52 | 31.4732 | 31.5307 |
| INF2 | Developing inflorescences (1-1.5 cm) | 46.1274 | 44.8555 | 52.2605 | 62.7751 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 40.478 | 61.936 | 56.6751 | 94.2625 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 86.0198 | 101.173 | 85.9026 | 400.071 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 45.3859 | 51.0853 | 46.3116 | 59.5359 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 25.3157 | 25.3364 | 22.6632 | 69.8557 |
CDS Structure of MLOC_73329
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73329.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g01810.1 |
+3 |
6e-110 |
327 |
206/231 (89%) |
13103.m00115 protein SNF7 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G22950.1 |
+3 |
2e-84 |
260 |
168/230 (73%) |
| Symbols: VPS24.1 | SNF7 family protein | chr5:7681380-7682720 FORWARD LENGTH=229 |