MLOC_73320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.338522.781313.225233.25191
LEAShoots from the seedlings (10 cm shoot stage)3.510272.722082.817982.68042
INF1Young developing inflorescences (5mm)3.35923.38423.989643.24747
INF2Developing inflorescences (1-1.5 cm)4.603844.352316.018765.70607
ROORoots from the seedlings (10 cm shoot stage)3.553544.197985.846155.52805
NODDeveloping tillers at six leaf stage, 3rd internode3.311533.600574.7681212.9141
CAR5Developing grain, bracts removed (5 DPA)4.363945.664055.508545.63227
CAR15Developing grain, bracts removed (15 DPA)3.035422.936343.094297.71863



CDS Structure of MLOC_73320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73320.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371034NoneNoneNoneNone
MLOC_73320.3CUST_6261_PI427708080AvailableAvailablecontig_63378 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45330.1 +3 5e-76 241 126/156 (81%) 13106.m04771 protein endonuclease V, putative, expressed
TAIR PP10 AT4G31150.1 +3 5e-98 299 148/248 (60%) endonuclease V family protein | chr4:15143907-15145583 REVERSE LENGTH=277