- Predicted Gene MLOC_73320
MLOC_73320 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_73320_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.33852 | 2.78131 | 3.22523 | 3.25191 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.51027 | 2.72208 | 2.81798 | 2.68042 |
INF1 | Young developing inflorescences (5mm) | 3.3592 | 3.3842 | 3.98964 | 3.24747 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.60384 | 4.35231 | 6.01876 | 5.70607 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.55354 | 4.19798 | 5.84615 | 5.52805 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.31153 | 3.60057 | 4.76812 | 12.9141 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.36394 | 5.66405 | 5.50854 | 5.63227 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.03542 | 2.93634 | 3.09429 | 7.71863 |
CDS Structure of MLOC_73320
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73320.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45330.1 |
+3 |
5e-76 |
241 |
126/156 (81%) |
13106.m04771 protein endonuclease V, putative, expressed |
TAIR PP10 |
AT4G31150.1 |
+3 |
5e-98 |
299 |
148/248 (60%) |
endonuclease V family protein | chr4:15143907-15145583 REVERSE LENGTH=277 |