- Predicted Gene MLOC_73319
MLOC_73319 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_73319_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_73319_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.9221 | 11.0641 | 11.6903 | 12.4368 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.5895 | 17.0759 | 18.7322 | 15.4973 |
INF1 | Young developing inflorescences (5mm) | 8.63935 | 12.2403 | 13.9672 | 10.8466 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.8165 | 16.7417 | 15.2397 | 19.9999 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.4151 | 20.1731 | 17.9044 | 27.3148 |
NOD | Developing tillers at six leaf stage, 3rd internode | 22.1124 | 33.8761 | 52.1241 | 142.045 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.0872 | 16.4185 | 14.648 | 17.2096 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.76216 | 10.0185 | 9.38233 | 25.5423 |
CDS Structure of MLOC_73319
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73319.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g27720.1 |
+1 |
2e-130 |
382 |
209/288 (73%) |
13101.m02879 protein E3 ubiquitin-protein ligase MGRN1, putative, expressed |
TAIR PP10 |
AT3G09770.1 |
+1 |
2e-80 |
256 |
131/249 (53%) |
RING/U-box superfamily protein | chr3:2996402-2997835 REVERSE LENGTH=388 |