MLOC_73307 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.702112.851313.403614.901
LEAShoots from the seedlings (10 cm shoot stage)0.04949420.058924600.0438427
INF1Young developing inflorescences (5mm)0.0492139000.0446661
INF2Developing inflorescences (1-1.5 cm)0.0264878000.0333034
ROORoots from the seedlings (10 cm shoot stage)21.022413.390614.568816.0312
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.0322757000.0297187
CAR15Developing grain, bracts removed (15 DPA)0.0224876000.0781186



CDS Structure of MLOC_73307






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73307.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364734NoneNoneNoneNone
AK367297NoneNoneNoneNone
MLOC_73307.1CUST_470_PI427708083AvailableAvailablecontig_63346 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 +1 8e-146 427 218/362 (60%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 +1 1e-113 344 169/341 (50%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363