- Predicted Gene MLOC_73304
MLOC_73304 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 55.5758 | 54.753 | 52.2475 | 53.5697 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 136.865 | 80.5603 | 86.2102 | 79.1781 |
| INF1 | Young developing inflorescences (5mm) | 20.5164 | 14.9646 | 16.2151 | 15.4066 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.26202 | 9.11459 | 11.0138 | 11.2248 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.23156 | 8.15435 | 9.94095 | 8.4491 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 77.7865 | 93.6048 | 130.207 | 264.477 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.2284 | 35.0053 | 31.6637 | 35.4221 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.71772 | 5.93058 | 4.43428 | 12.4108 |
CDS Structure of MLOC_73304
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73304.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g35370.1 |
+2 |
0.0 |
650 |
341/398 (86%) |
13110.m03173 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed |
| TAIR PP10 |
AT5G54190.1 |
+2 |
0.0 |
578 |
296/406 (73%) |
| Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992773 REVERSE LENGTH=405 |
