MLOC_73301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1551.84978.7731284.451056.79
LEAShoots from the seedlings (10 cm shoot stage)523.424246.089391.783280.668
INF1Young developing inflorescences (5mm)293.62317.22315.485255.553
INF2Developing inflorescences (1-1.5 cm)190.98210.26238.706216.496
ROORoots from the seedlings (10 cm shoot stage)2286.17766.305952.682898.226
NODDeveloping tillers at six leaf stage, 3rd internode1179.881351.751167.812726.54
CAR5Developing grain, bracts removed (5 DPA)282.722275.702232.753235.376
CAR15Developing grain, bracts removed (15 DPA)87.631460.654973.5164172.577



CDS Structure of MLOC_73301






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73301.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367756NoneNoneNoneNone
MLOC_73301.3CUST_6259_PI427708080AvailableAvailablecontig_63334 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g05290.1 -1 3e-130 385 224/250 (90%) 13103.m00556 protein aquaporin protein, putative, expressed
TAIR PP10 AT2G36830.1 -1 7e-108 327 185/251 (74%) | Symbols: GAMMA-TIP, TIP1;1, GAMMA-TIP1 | gamma tonoplast intrinsic protein | chr2:15445490-15446336 FORWARD LENGTH=251