MLOC_73265 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.7011311.479711.41339.71207
LEAShoots from the seedlings (10 cm shoot stage)7.070175.163996.91654.84119
INF1Young developing inflorescences (5mm)5.30533.866244.927143.81596
INF2Developing inflorescences (1-1.5 cm)4.188933.791742.956874.00051
ROORoots from the seedlings (10 cm shoot stage)8.930937.110476.512237.68828
NODDeveloping tillers at six leaf stage, 3rd internode5.397934.623527.2006414.2886
CAR5Developing grain, bracts removed (5 DPA)6.33445.400795.752325.33419
CAR15Developing grain, bracts removed (15 DPA)1.75251.685711.072683.91075



CDS Structure of MLOC_73265






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73265.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73265.1CUST_17833_PI427708080AvailableAvailablecontig_63266 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42000.1 -1 9e-23 97 48/52 (92%) 13104.m04132 protein 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed
TAIR PP10 AT2G44050.1 -1 4e-12 66 30/50 (60%) | Symbols: COS1 | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase | chr2:18224304-18225917 FORWARD LENGTH=227