MLOC_73235 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.457320.8960070.8090661.10626
LEAShoots from the seedlings (10 cm shoot stage)1.684350.9853671.222111.11923
INF1Young developing inflorescences (5mm)1.70281.673222.32491.84905
INF2Developing inflorescences (1-1.5 cm)2.851833.659263.114714.01466
ROORoots from the seedlings (10 cm shoot stage)0.6471621.80771.120282.23495
NODDeveloping tillers at six leaf stage, 3rd internode1.376580.5054571.364591.93543
CAR5Developing grain, bracts removed (5 DPA)1.816341.649572.578982.27965
CAR15Developing grain, bracts removed (15 DPA)0.2386960.2159510.4916320.824324



CDS Structure of MLOC_73235






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73235.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73235.1CUST_9837_PI427708083AvailableAvailablecontig_63208 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40630.1 -1 2e-54 179 91/107 (85%) 13101.m04159 protein uncharacterized protein PA4923, putative, expressed
TAIR PP10 AT2G37210.1 -1 1e-37 134 61/77 (79%) lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215