MLOC_73233 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.247724.732329.53929.1085
LEAShoots from the seedlings (10 cm shoot stage)53.6879.5523826.068324.9717
INF1Young developing inflorescences (5mm)0.3029930.2665130.06493490.206225
INF2Developing inflorescences (1-1.5 cm)0.4571560.1815750.1967080.33075
ROORoots from the seedlings (10 cm shoot stage)78.518160.153636.579371.303
NODDeveloping tillers at six leaf stage, 3rd internode995.906886.222157.8582054.31
CAR5Developing grain, bracts removed (5 DPA)0.6763090.4576150.2851330.510766
CAR15Developing grain, bracts removed (15 DPA)0.1987310.086103400.444091



CDS Structure of MLOC_73233






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73233.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251181.1NoneNoneNoneNone
MLOC_73233.1CUST_6250_PI427708080AvailableAvailablecontig_63200 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 -2 0.0 551 287/361 (80%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 -2 1e-150 437 219/333 (66%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363