MLOC_73231 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.3525919.839914.815913.4171
LEAShoots from the seedlings (10 cm shoot stage)11.52768.994925.644986.60504
INF1Young developing inflorescences (5mm)25.831523.670523.893418.8722
INF2Developing inflorescences (1-1.5 cm)18.744521.851318.359320.3803
ROORoots from the seedlings (10 cm shoot stage)4.501639.071819.262148.7229
NODDeveloping tillers at six leaf stage, 3rd internode2.643822.916315.454139.07331
CAR5Developing grain, bracts removed (5 DPA)23.180822.819822.473220.8272
CAR15Developing grain, bracts removed (15 DPA)16.366812.509313.17831.1639



CDS Structure of MLOC_73231






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73231.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73231.1CUST_13159_PI427708083AvailableAvailablecontig_63197 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48510.1 -3 9e-53 185 95/116 (82%) 13105.m05167 protein phenylalanyl-tRNA synthetase beta chain, putative, expressed
TAIR PP10 AT1G72550.2 -3 3e-42 154 76/114 (67%) tRNA synthetase beta subunit family protein | chr1:27319999-27323908 REVERSE LENGTH=584