MLOC_73218 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)1.57775001.51212
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)005.545051.72283
NODDeveloping tillers at six leaf stage, 3rd internode4.222220.4838453.166523.28588
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_73218






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73218.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73218.1CUST_9833_PI427708083AvailableAvailablecontig_63171 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64970.1 +2 3e-17 74 35/41 (85%) 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G33950.2 +2 2e-16 71 32/41 (78%) | Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | Protein kinase superfamily protein | chr4:16272819-16274657 FORWARD LENGTH=314