MLOC_73217 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000.303981
LEAShoots from the seedlings (10 cm shoot stage)0.433597000.414103
INF1Young developing inflorescences (5mm)0.213170.46735100.602832
INF2Developing inflorescences (1-1.5 cm)0.9738030.2130490.5463761.24322
ROORoots from the seedlings (10 cm shoot stage)00.3158110.7369240.967948
NODDeveloping tillers at six leaf stage, 3rd internode0.3476240.1844740.0802730.831397
CAR5Developing grain, bracts removed (5 DPA)0.5694131.054170.7755391.18661
CAR15Developing grain, bracts removed (15 DPA)00.6054470.2612611.77249



CDS Structure of MLOC_73217






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73217.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73217.1CUST_15892_PI427708080AvailableAvailablecontig_63171 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64970.1 +1 2e-15 71 34/41 (83%) 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G33950.1 +1 6e-12 60 27/40 (68%) | Symbols: OST1, SNRK2-6, SRK2E, SNRK2.6, P44, ATOST1 | Protein kinase superfamily protein | chr4:16272364-16274657 FORWARD LENGTH=362