MLOC_73213 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.960364.778285.834876.21993
LEAShoots from the seedlings (10 cm shoot stage)4.573362.488432.609812.80892
INF1Young developing inflorescences (5mm)3.511813.376324.361843.22175
INF2Developing inflorescences (1-1.5 cm)3.21532.948393.794573.52653
ROORoots from the seedlings (10 cm shoot stage)8.360394.327446.611276.26352
NODDeveloping tillers at six leaf stage, 3rd internode5.011028.379584.2833823.9166
CAR5Developing grain, bracts removed (5 DPA)2.967952.294992.353292.40994
CAR15Developing grain, bracts removed (15 DPA)1.111220.8956510.9141442.32351



CDS Structure of MLOC_73213






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73213.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73213.1CUST_13157_PI427708083AvailableAvailablecontig_631672 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15260.1 +3 2e-34 123 56/61 (92%) 13101.m01685 protein dynein light chain type 1 domain containing protein, expressed
TAIR PP10 AT4G15930.1 +3 1e-23 94 42/60 (70%) Dynein light chain type 1 family protein | chr4:9036344-9037825 FORWARD LENGTH=123