MLOC_7321 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.589351.041250.9845281.20483
LEAShoots from the seedlings (10 cm shoot stage)1.013130.4782070.3927330.562767
INF1Young developing inflorescences (5mm)2.533232.907842.109172.17669
INF2Developing inflorescences (1-1.5 cm)1.525631.685411.584361.78237
ROORoots from the seedlings (10 cm shoot stage)0.7739720.9437641.719781.25622
NODDeveloping tillers at six leaf stage, 3rd internode0.03679640.02147610.03172080.0829582
CAR5Developing grain, bracts removed (5 DPA)1.463551.560481.832531.59616
CAR15Developing grain, bracts removed (15 DPA)0.3541340.3346850.2724370.772906



CDS Structure of MLOC_7321






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7321.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7321.1CUST_15891_PI427708080AvailableAvailablecontig_139014 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34720.1 +1 0.0 1083 562/691 (81%) 13110.m03100 protein LOI1, putative, expressed
TAIR PP10 AT1G68930.1 +1 2e-159 484 264/675 (39%) pentatricopeptide (PPR) repeat-containing protein | chr1:25918314-25920545 FORWARD LENGTH=743