- Predicted Gene MLOC_73208
MLOC_73208 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.05 | 11.0787 | 9.22091 | 9.93168 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.80917 | 0.506102 | 0.704355 | 1.18284 |
| INF1 | Young developing inflorescences (5mm) | 23.3311 | 22.7841 | 19.5284 | 18.1716 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.1456 | 18.1711 | 12.2133 | 16.5185 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.98339 | 6.77315 | 6.6026 | 7.25746 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0601903 | 0.0888264 | 0.0338037 | 0.258627 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.8185 | 22.3514 | 23.692 | 21.0686 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.11954 | 0.650119 | 1.27025 | 2.22124 |
CDS Structure of MLOC_73208
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_73208.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g06340.1 |
+1 |
0.0 |
974 |
488/547 (89%) |
13102.m00697 protein EH domain-containing protein 1, putative, expressed |
| TAIR PP10 |
AT3G20290.2 |
+1 |
0.0 |
850 |
424/547 (78%) |
| Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 | chr3:7075057-7078655 REVERSE LENGTH=545 |
