MLOC_73204 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.740529.078329.383231.2518
LEAShoots from the seedlings (10 cm shoot stage)62.70543.705748.020840.8668
INF1Young developing inflorescences (5mm)1.04251.930592.043281.51194
INF2Developing inflorescences (1-1.5 cm)1.147110.9485011.472161.28263
ROORoots from the seedlings (10 cm shoot stage)79.399865.444354.054668.1782
NODDeveloping tillers at six leaf stage, 3rd internode79.0586117.2898.73161231.574
CAR5Developing grain, bracts removed (5 DPA)28.463231.610626.437729.707
CAR15Developing grain, bracts removed (15 DPA)8.689699.0510810.24324.8278



CDS Structure of MLOC_73204






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73204.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375147NoneNoneNoneNone
MLOC_73204.3CUST_6245_PI427708080AvailableAvailablecontig_63149 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g60770.1 -3 3e-138 403 201/227 (89%) 13101.m06469 protein expansin precursor, putative, expressed
TAIR PP10 AT1G69530.2 -3 2e-113 338 167/224 (75%) | Symbols: ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2, EXPA1 | expansin A1 | chr1:26142034-26143051 FORWARD LENGTH=250