MLOC_73197 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.835791.105971.071711.16003
LEAShoots from the seedlings (10 cm shoot stage)1.28660.6843520.6804730.714733
INF1Young developing inflorescences (5mm)3.26974.005314.520972.90344
INF2Developing inflorescences (1-1.5 cm)2.681953.105243.751912.96405
ROORoots from the seedlings (10 cm shoot stage)1.254421.664923.147391.72231
NODDeveloping tillers at six leaf stage, 3rd internode1.093840.659890.5897621.77174
CAR5Developing grain, bracts removed (5 DPA)1.704411.704332.29421.54468
CAR15Developing grain, bracts removed (15 DPA)0.09819690.261070.1425340.347423



CDS Structure of MLOC_73197






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73197.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_73197.2CUST_17832_PI427708080AvailableAvailablecontig_63136 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37060.1 -3 9e-29 118 62/84 (74%) 13109.m03669 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT5G03470.1 -3 9e-11 64 30/88 (34%) | Symbols: ATB ALPHA | Protein phosphatase 2A regulatory B subunit family protein | chr5:866795-868872 FORWARD LENGTH=495