MLOC_73194 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains176.748130.38130.245149.163
LEAShoots from the seedlings (10 cm shoot stage)66.294266.914275.359158.0477
INF1Young developing inflorescences (5mm)336.147333.791332.138290.276
INF2Developing inflorescences (1-1.5 cm)221.555204.251233.877244.187
ROORoots from the seedlings (10 cm shoot stage)190.176185.125212.47231.925
NODDeveloping tillers at six leaf stage, 3rd internode9.161929.8933643.25847.0358
CAR5Developing grain, bracts removed (5 DPA)141.596146.29145.54148.236
CAR15Developing grain, bracts removed (15 DPA)41.684241.164831.423294.8279



CDS Structure of MLOC_73194






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_73194.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250651.1NoneNoneNoneNone
MLOC_73194.1CUST_6243_PI427708080AvailableAvailablecontig_63131 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13800.1 +3 1e-67 213 122/128 (95%) 13103.m01601 protein ribosomal protein L7Ae, putative, expressed
TAIR PP10 AT5G20160.1 +3 1e-62 199 116/128 (91%) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr5:6804075-6805102 REVERSE LENGTH=128