MLOC_7319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.647925.800617.176655.83171
LEAShoots from the seedlings (10 cm shoot stage)4.061620.3327461.204341.60826
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.06803740.1953980.3470120.21625
ROORoots from the seedlings (10 cm shoot stage)3.818883.699293.320273.95644
NODDeveloping tillers at six leaf stage, 3rd internode22.644611.07882.4985525.7522
CAR5Developing grain, bracts removed (5 DPA)5.946557.887197.428746.70247
CAR15Developing grain, bracts removed (15 DPA)11.088712.67728.9139624.8361



CDS Structure of MLOC_7319






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7319.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7319.1CUST_15889_PI427708080AvailableAvailablecontig_139009 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g02470.1 -1 4e-33 118 54/76 (71%) 13106.m25646 protein ATOZI1, putative, expressed
TAIR PP10 AT1G01170.2 -1 4e-32 115 52/72 (72%) Protein of unknown function (DUF1138) | chr1:74105-74443 REVERSE LENGTH=83